何舜平

性别

男

工作单位

中国科学院水生生物研究所

职称/职务

研究员

主要研究方向

鱼类生物地理学；鱼类比较基因组学；生物信息学；鱼类系统发育

工作年限（从事该领域研究的起始时间）

37年（起始：1988）

论文著作

（1） K. Wang, J. Wang, C. Zhu, L. Yang, Y. Ren, J. Ruan, G. Fan, J. Hu, W. Xu, X. Bi, Y. Zhu, Y. Song, H. Chen, T. Ma, R. Zhao, H. Jiang, B. Zhang, C. Feng, Y. Yuan, X. Gan, Y. Li, H. Zeng, Q. Liu, Y. Zhang, F. Shao, S. Hao, H. Zhang, X. Xu, X. Liu, D. Wang, M. Zhu, G. Zhang, W. Zhao, Q. Qiu, S. He, W. Wang, African lungfish genome sheds light on the vertebrate water-to-land transition, Cell, (2021)., CELL, 2021, 第 1 作者 通讯作者

（2） Self-powered soft robot in the Mariana Trench, NATURE, 2021, 第 19 作者

（3） X. Bi, K. Wang, L. Yang, H. Pan, H. Jiang, Q. Wei, M. Fang, H. Yu, C. Zhu, Y. Cai, Y. He, X. Gan, H. Zeng, D. Yu, Y. Zhu, H. Jiang, Q. Qiu, H. Yang, Y.E. Zhang, W. Wang, M. Zhu, S. He, G. Zhang, Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes,, CELL, 2021, 第 1 作者 通讯作者

（4） Z. L, L. Gong, Y. Ren, Y. Chen, Z. Wang, L. Liu, H. Li, X. Chen, Z. Li, H. Luo, H. Jiang, Y. Zeng, Y. Wang, K. Wang, C. Zhang, H. Jiang, W. Wan, Y. Qin, J. Zhang, L. Zhu, W. Shi, S. He, B. Mao, W. Wang, X. Kong, Y. Li, Large-scale sequencing of flatfish genomes provides insights into the polyphyletic origin of their specialized body plan, Nat Genet, (2021), NATURE Genetics, 2021, 第 1 作者

（5） B. Wu, C. Feng, C. Zhu, W. Xu, Y. Yuan, M. Hu, K. Yuan, Y. Li, Y. Ren, Y. Zhou, H. Jiang, Q. Qiu, W. Wang, S. He, K. Wang, The genomes of two billfishes provide insights into the evolution of endothermy in teleosts, Mol Biol Evol, (2021)., Molecular Biology and Evolution, 2021, 第 1 作者 通讯作者

（6） Jianbo Jian#, Liandong Yang#, Xiaoni Gan#, Bin Wu#, Li Gao, Honghui Zeng, Xuzhen Wang, Zhiqiang Liang, Ying Wang, Lihua Fang, Jie Li, Sanjie Jiang, Kang Du, Beide Fu, Mingzhou Bai, Ming Chen, Xiaodong Fang, Huanzhang Liu & Shunping He*, Whole genome sequencing of silver carp (Hypophthalmichthys molitrix) and bighead carp (Hypophthalmichthys nobilis) provide novel insights into their evolution and speciation. Molecular Ecology Resources, 2020, Molecular Ecology Resources, 2020, 第 1 作者 通讯作者

（7） Guangyi Fan#, Yue Song#, Liandong Yang#, Xiaoyun Huang, Suyu Zhang, Mengqi Zhang, Xianwei Yang, Yue Chang, He Zhang, Yongxin Li, Shanshan Liu, Lili Yu, Jeffery Chu, Inge Seim, Chenguang Feng, Thomas J Near, Rod A Wing, Wen Wang, Kun Wang, Jing Wang, Xun Xu, Huanming Yang, Xin Liu, Nansheng Chen, and Shunping He*, Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K). GigaScience, 2020, 9 (8), 1-8, GigaScience, 2020, 第 1 作者 通讯作者

（8） Juan Chen#, Liandong Yang#, Renyi Zhang, Cunfang Zhang, Haifeng Jiang, Yi Lei, Wenqi Lv, Fei Tian*, Kai Zhao*, and Shunping He*, Transcriptome-wide patterns of the genetic and expression variation in two sympatric schizothoracine fishes in a Tibetan Plateau glacier lake. Genome biology and evolution, 2020, 12: 3725-3737, Genome Biology and Evolution, 2020, 第 1 作者 通讯作者

（9） Wenqi Lv, Haifeng Jiang, Jing Bo, Cheng Wang, Liandong Yang*, and Shunping He*, Comparative mitochondrial genome analysis of Neodontobutis hainanensis and Perccottus glenii reveals conserved genome organization and phylogeny. Genomics, 2020, 112, 38623870, Genomics, 2020, 第 1 作者 通讯作者

（10） K. Wang, Y. Shen, Y. Yang, X. Gan, G. Liu, K. Hu, Y. Li, Z. Gao, L. Zhu, G. Yan, L. He, X. Shan, L. Yang, S. Lu, H. Zeng, X. Pan, C. Liu, Y. Yuan, C. Feng, W. Xu, C. Zhu, W. Xiao, Y. Dong, W. Wang, Q. Qiu, S. He, Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptation, Nat Ecol Evol, 3 (2019) 823-833., NATURE Ecology and Evolution, 2019, 第 1 作者 通讯作者

（11） Ancient duplications and functional divergence in the interferon regulatory factors of vertebrates provide insights into the evolution of vertebrate immune systems, DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY, 2018, 第 7 作者 通讯作者

（12） Comprehensive Transcriptome Analysis Reveals Accelerated Genic Evolution in a Tibet Fish, Gymnodiptychus pachycheilus, GENOME BIOLOGY AND EVOLUTION, 2015, 第 4 作者 通讯作者

（13） Evidence for Adaptation to the Tibetan Plateau Inferred from Tibetan Loach Transcriptomes, GENOME BIOLOGY AND EVOLUTION, 2015, 第 6 作者 通讯作者

（14） Analysis of the nicotinamide phosphoribosyltransferase family provides insight into vertebrate adaptation to different oxygen levels during the water-to-land transition, FEBS JOURNAL, 2015, 第 5 作者 通讯作者

（15） Evolutionary fate and implications of retrocopies in the African coelacanth genome, BMC GENOMICS, 2015, 第 2 作者 通讯作者

（16） Analysis of hypoxia-inducible factor alpha polyploidization reveals adaptation to Tibetan plateau in the evolution of schizothoracine fish, BMC EVOLUTIONARY BIOLOGY, 2014, 第 5 作者 通讯作者

（17） Cyprinid phylogeny based on Bayesian and maximum likelihood analyses of partitioned data: implications for Cyprinidae systematics, Cyprinid phylogeny based on Bayesian and maximum likelihood analyses of partitioned data: implications for Cyprinidae systematics, 中国科学：生命科学英文版, 2012, 第 5 作者

（18） Integrating multi-origin expression data improves the resolution of deep phylogeny of ray-finned fish (Actinopterygii), SCIENTIFIC REPORTS, 2012, 第 5 作者 通讯作者

（19） A phylogeographic, demographic and historical analysis of the short-tailed pit viper (Gloydius brevicaudus): evidence for early divergence and late expansion during the Pleistocene, MOLECULAR ECOLOGY, 2011, 第 3 作者 通讯作者

（20） Hox genes of the Japanese eel Anguilla japonica and Hox cluster evolution in teleosts., JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION, 2010, 第 11 作者

（21） Multiple source genes of HAmo SINE actively expanded and ongoing retroposition in cyprinid genomes relying on its partner LINE, BMC EVOLUTIONARY BIOLOGY, 2010, 第 3 作者 通讯作者

（22） The youngest split in sympatric schizothoracine fish (Cyprinidae) is shaped by ecological adaptations in a Tibetan Plateau glacier lake, MOLECULAR ECOLOGY, 2009, 第 6 作者